miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Lactuca virosa



ABOUT THIS RECORD

ID: MNEST001349
species: Lactuca virosa
miRNA family: MIR419
source: miRNEST

Taxonomy by NCBI:
Lactuca virosa Lactuca Lactucinae Cichorieae Cichorioideae Asteraceae Asterales campanulids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TTATGAATGCTGAAGATGTGA

miRNA*
ATATCAAGGGCAGACATGGCA

mismatches: 5
bulges: 0

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pre-miRNA
TTTATGCGGTGGTATGTATGTTATGAATGCTGAAGATGTGATGATTATATCAAGGGCAGACATGGCATTTGATGCGGGTGATTA

dot-bracket secondary structure
....((((....((...((((((((..((((...(((((((...)))))))...))))..)))))))).)).))))........


SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits
UniProt no hits

RFAM no hits
most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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